The detailed information of tRNA gene sequence


Sequence ID>C171109640
Genome IDCP020570
Search identical group
Phylum/ClassActinomycetota
SpeciesStreptomyces violaceoruber S21 [CP020570]
Start position on genome 4884858
End posion on genome 4884933
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cagtcatcaa
tRNA gene sequence 
AGCGGTGTAGCTCAGTCGGTAGAGCAAGCGGCTCATAATCGCTGTGTCACCGGTTCAAGT
CCGGTCACCGCTACTA
Downstream region at tRNA end position 
acggtagccg
Secondary structure (Cloverleaf model)
>C171109640	Met	CAT
                   a      ACTA acggtagccg
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T G G C C     A
      T G A        A      | | | | |     A
    C       C T C G       A C C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    A - T
                    G - C
                    C - G
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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