The detailed information of tRNA gene sequence


Sequence ID>C171115012
Genome IDCP021023
Search identical group
Phylum/ClassPlanctomycetota
SpeciesSedimentisphaera salicampi ST-PulAB-D4 [CP021023]
Start position on genome 949172
End posion on genome 949097
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctcgtttgat
tRNA gene sequence 
TGCGGGATAGAGCAGGCTGGTTAGCTCGTCGGGCTCATAACCCGGAGGTCACAGGTTCGA
ATCCTGTTCCCGCTACtt
Downstream region at tRNA end position 
attgatataa
Secondary structure (Cloverleaf model)
>C171115012	Met	CAT
                   t      ACtt attgatataa
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     T G T C C     A
    C G G A        A      | | | | |     G
  T         C G A G       A C A G G     C
  G         | | | |                 T T
  G         G C T C
    T T A          G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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