The detailed information of tRNA gene sequence


Sequence ID>C171127248
Genome IDCP021983
Search identical group
Phylum/ClassCyanobacteriota
SpeciesHalomicronema hongdechloris C2206 [CP021983]
Start position on genome 1221027
End posion on genome 1221099
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gagagcaaac
tRNA gene sequence 
CCAGGGTTGGCCGAGCGGATTAGGCAGCGAACTCATAATTCGCCTTAGGCAGGTTCGACT
CCTGCACCCTGGAttt
Downstream region at tRNA end position 
agcgcatggg
Secondary structure (Cloverleaf model)
>C171127248	Met	CAT
                   c      Attt agcgcatggg
                     C - G
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T C
                    T     C G T C C     A
      C G A        G      | | | | |     G
    G       G C C G       G C A G G     C
    G         | | |                 T T
    A       A G G C
      T T          A     CTTAG
                    G - C
                    C - G
                    G - C
                    A - T
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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