The detailed information of tRNA gene sequence


Sequence ID>C171127266
Genome IDCP021983
Search identical group
Phylum/ClassCyanobacteriota
SpeciesHalomicronema hongdechloris C2206 [CP021983]
Start position on genome 4594003
End posion on genome 4594078
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aggcaactaT
tRNA gene sequence 
GGCTCAGTAGCTCAGCGGTAGAGCAGGGGACTCATAAGCCCTTGGTCGCGTGTTCAAATC
ACGCCTGAGCCATCC
Downstream region at tRNA end position 
tacagcattg
Secondary structure (Cloverleaf model)
>C171127266	Met	CAT
                   T      ATCC tacagcattg
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T
                     G - C          T A
                    T     C G C A C     A
        G A        A      | | | | |     A
      C     C T C G       G C G T G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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