The detailed information of tRNA gene sequence


Sequence ID>C171129215
Genome IDLT605205
Search identical group
Phylum/ClassBacteroidota
SpeciesProteiniphilum saccharofermentans M3/6 [LT605205]
Start position on genome 2188596
End posion on genome 2188520
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
attttttgtt
tRNA gene sequence 
GGCGAGATAGCTCAGTTGGTTAGAGCGCATGATTCATAATCATGAGGTCGGGGGATCATG
CCCCCCTCTCGCTACAA
Downstream region at tRNA end position 
attgaatatt
Secondary structure (Cloverleaf model)
>C171129215	Met	CAT
                   t      ACAA attgaatatt
                     G + T
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          C G
                    T     C C C C C     T
      T G A        A      | | | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 A T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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