The detailed information of tRNA gene sequence


Sequence ID>C171131915
Genome IDLT859958
Search identical group
Phylum/ClassChloroflexota
SpeciesBrevefilum fermentans [LT859958]
Start position on genome 1705775
End posion on genome 1705702
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccaaaaagcT
tRNA gene sequence 
GGCGAAGTAGCTCAATGGTAGAGCAGTGGACTCATAAGCCATTGGTTGGCGGTTCAAATC
CGCCCTTCGCCATgt
Downstream region at tRNA end position 
tttttattaa
Secondary structure (Cloverleaf model)
>C171131915	Met	CAT
                   T      ATgt tttttattaa
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C C G C C     A
        A A        A      | | | | |     A
      T     C T C G       G G C G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTT
                    G + T
                    T - A
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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