The detailed information of tRNA gene sequence


Sequence ID>C173000688
Genome IDCP015766
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBordetella pertussis VA-15 [CP015766]
Start position on genome 266431
End posion on genome 266353
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaacatttcc
tRNA gene sequence 
TGGCCTCTAGCTCATGCCTGGTTAGAGCAGCGGACTCATAATCCGTTGGTGCCGAGTTCG
ACTCTCGGGGGGCCTACCA
Downstream region at tRNA end position 
agtaaacatg
Secondary structure (Cloverleaf model)
>C173000688	Met	CAT
                   c      ACCA agtaaacatg
                     T   T
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G          T C
                    T     G G C T C     A
    C G T A        A      | | | | |     G
  C         C T C G       C C G A G     C
  T         | | | |                 T T
  G         G A G C
    G T T A        A     TGGTG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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