The detailed information of tRNA gene sequence


Sequence ID>C173001747
Genome IDCP021107
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBordetella genomosp. 6 AU22978 [CP021107]
Start position on genome 1828314
End posion on genome 1828392
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aacatttcct
tRNA gene sequence 
GGGCCTCTAGCTCATGCCTGGTTAGAGCAGCGGACTCATAATCCGTTGGTGCCGAGTTCG
ACTCTCGGGGGGCCTACCA
Downstream region at tRNA end position 
aaaacccagg
Secondary structure (Cloverleaf model)
>C173001747	Met	CAT
                   t      ACCA aaaacccagg
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G          T C
                    T     G G C T C     A
    C G T A        A      | | | | |     G
  C         C T C G       C C G A G     C
  T         | | | |                 T T
  G         G A G C
    G T T A        A     TGGTG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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