The detailed information of tRNA gene sequence


Sequence ID>WENV180013259
Genome IDFMSI01060545
Search identical group
Phylum/Class[FMSI] soil metagenome; Soil
Species
Start position on genome 5643
End posion on genome 5547
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aagataccca
tRNA gene sequence 
GGGAGCGTTTGGGTCCCGGTGGGCTTCGCGGACTTCAAATCCGTCGGGAGGCATTCTTAA
TGTCTCCGGTGGGTTCGACTCCCATACGCTCCCGCCA
Downstream region at tRNA end position 
gatttggtgg
Secondary structure (Cloverleaf model)
>WENV180013259	SeC	TCA
                   a      GCCA gatttggtgg
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    T     T A C C C     A
      C C C        T      + | | | |     G
    G       T G G G       G T G G G     C
    G       + | + +                 T T
    T       G C T T
      G G          C     CGGGAGGCATTCTTAATGTCTCCG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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