The detailed information of tRNA gene sequence


Sequence ID>W141000082
Genome IDAADL01001503
Search identical group
Phylum/ClassUnclassified
Speciesmine drainage metagenome Group III [AADL]
Start position on genome 18806
End posion on genome 18890
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
atgggagtaa
tRNA gene sequence 
GCTGGGATAGCCTAGCCCGGTAAGACGGTAGATTCGAAATCTACTGCTAGAAATAGCTCG
GGAGTTCAAATCTCCCTCCCAGCGCtt
Downstream region at tRNA end position 
atttattcca
Secondary structure (Cloverleaf model)
>W141000082	Ser	CGA
                   a      GCtt atttattcca
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C C T C     A
      C G A        A      | | | | |     A
    C       T C C G       G G G A G     C
    C       | |   |                 T T
    G       A G A C
      G T A        G     TGCTAGAAATAGCTC
                    G - C
                    T - A
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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