The detailed information of tRNA gene sequence


Sequence ID>W141000088
Genome IDAADL01001522
Search identical group
Phylum/ClassUnclassified
Speciesmine drainage metagenome Group III [AADL]
Start position on genome 39559
End posion on genome 39475
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cagcgtaaaT
tRNA gene sequence 
GCGGGGATGGCCCAGTGGTACGGCGGCAGCCTGCTAAGCTGTTTCTCGAAATGAGAGCAT
GGGTTCAAATCCCATTCCCCGCGTtc
Downstream region at tRNA end position 
taattttaat
Secondary structure (Cloverleaf model)
>W141000088	Ser	GCT
                   T      GTtc taattttaat
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     T A C C C     A
        G A        G      | | | | |     A
      T     C C C G       A T G G G     C
      G       | | |                 T T
      G     C G G C
        T A        G     TTCTCGAAATGAGAGC
                    G + T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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