The detailed information of tRNA gene sequence


Sequence ID>W141000625
Genome IDADEP01000005
Search identical group
Phylum/ClassActinomycetota
SpeciesGardnerella vaginalis 6420B [ADEP]
Start position on genome 183434
End posion on genome 183358
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaggctctct
tRNA gene sequence 
GGCGGGGTAGCTCAGCTGGCTAGAGCGTACGACTCATAATCGTAAGGTCAAGAGTTCGAG
TCTCTTCCTCGCTACAA
Downstream region at tRNA end position 
cggccagtag
Secondary structure (Cloverleaf model)
>W141000625	Met	CAT
                   t      ACAA cggccagtag
                     G + T
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     G - C          T G
                    T     T T C T C     A
      C G A        A      | | | | |     G
    T       C T C G       A A G A G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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