The detailed information of tRNA gene sequence


Sequence ID>W141000626
Genome IDADEP01000005
Search identical group
Phylum/ClassActinomycetota
SpeciesGardnerella vaginalis 6420B [ADEP]
Start position on genome 176863
End posion on genome 176776
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtaaacaagt
tRNA gene sequence 
GGAGTCATGCCTGAGTGGCCGATAGGGGCACCCTGCTAAGGTGTTAGTCGTGTAAGCGGC
TCGAGAGTTCGAATCTCTCTGACTCCGCgg
Downstream region at tRNA end position 
gttactccgg
Secondary structure (Cloverleaf model)
>W141000626	Ser	GCT
                   t      GCgg gttactccgg
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     C - G
                     A - T          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G T C C       G A G A G     C
    G       + | | |                 T T
    C       T A G G
      C G A        G     TAGTCGTGTAAGCGGCTC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK