The detailed information of tRNA gene sequence


Sequence ID>WENV180040727
Genome IDLLBZ010009554
Search identical group
Phylum/Class[LLBZ] soil metagenome; soil from tomato rhizosphere
Species
Start position on genome 3794
End posion on genome 3706
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
attctaaagC
tRNA gene sequence 
GGAGAGATGGCGGAGTGGTCGATCGCGCACGCTTGGAAAGCGTGTGTAGGTGAAAGCCTA
CCGAGGGTTCGAATCCCTCCCTCTCCGNnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV180040727	Ser	GGA
                   C      GNnn nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A   C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G G C G       G A G G G     C
    G       + | | |                 T T
    T       T C G C
      C G A        G     TGTAGGTGAAAGCCTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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