The detailed information of tRNA gene sequence


Sequence ID>WENV180042217
Genome IDLQAE01000004
Search identical group
Phylum/Class[LQAE] bioreactor metagenome; bioreactor_1 inoculated with Wadden Sea sediment; 1st replicate of a sulfate-reducing system that
Species
Start position on genome 39713
End posion on genome 39789
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
atcgatcgtt
tRNA gene sequence 
GCGCCTGTAGCTCAGCTGGATAGAGCAACGGACTTCTAATCCGTAGGCCACAGGTTCGAA
TCCTGTCAGGCGCGCCA
Downstream region at tRNA end position 
ctgatatcaa
Secondary structure (Cloverleaf model)
>WENV180042217	Arg	TCT
                   t      GCCA ctgatatcaa
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T G T C C     A
      C G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     AGGCC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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