The detailed information of tRNA gene sequence


Sequence ID>WENV180042260
Genome IDLQAE01000057
Search identical group
Phylum/Class[LQAE] bioreactor metagenome; bioreactor_1 inoculated with Wadden Sea sediment; 1st replicate of a sulfate-reducing system that
Species
Start position on genome 51491
End posion on genome 51581
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aattgactgc
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGCTGAAGGTGCACGCCTGGAAAGCGTGTGTATCCTAACCGGGT
ACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tattcccctt
Secondary structure (Cloverleaf model)
>WENV180042260	Ser	GGA
                   c      GCCA tattcccctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | +                 T T
    C       A G G T
      T G A        G     TGTATCCTAACCGGGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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