The detailed information of tRNA gene sequence


Sequence ID>WENV180042296
Genome IDLQAE01000217
Search identical group
Phylum/Class[LQAE] bioreactor metagenome; bioreactor_1 inoculated with Wadden Sea sediment; 1st replicate of a sulfate-reducing system that
Species
Start position on genome 17819
End posion on genome 17910
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atcagcttgc
tRNA gene sequence 
GGAGAAATGGCCGAGTGGCTGAAGGCGCTCGCCTGCTAAGCGAGTATGGGGGGAAACTTC
CATCGAGAGTTCGAATCTCTCTTTCTCCGCCA
Downstream region at tRNA end position 
ctatcaatca
Secondary structure (Cloverleaf model)
>WENV180042296	Ser	GCT
                   c      GCCA ctatcaatca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G A G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGGGGGGAAACTTCCATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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