The detailed information of tRNA gene sequence


Sequence ID>WENV180042422
Genome IDLQAE01018177
Search identical group
Phylum/Class[LQAE] bioreactor metagenome; bioreactor_1 inoculated with Wadden Sea sediment; 1st replicate of a sulfate-reducing system that
Species
Start position on genome 190
End posion on genome 265
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
atctaacatt
tRNA gene sequence 
GGAGCTATAGCAAAGCTGGTAATGCCCCGGATTGCAAATCCGGTATGCGTTGGTTCGAGT
CCGACTAGCTCCTCCA
Downstream region at tRNA end position 
ttttcataga
Secondary structure (Cloverleaf model)
>WENV180042422	Cys	GCA
                   t      TCCA ttttcataga
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     A - T          T G
                    T     C A G C C     A
      C G A        A      | | + | |     G
    T       A A C G       G T T G G     C
    G         | | |                 T T
    G       A T G C
      T A          C     TATGC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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