The detailed information of tRNA gene sequence


Sequence ID>WENV180042578
Genome IDLQAF01007439
Search identical group
Phylum/Class[LQAF] bioreactor metagenome; bioreactor_2 inoculated with Wadden Sea sediment; 2nd replicate of a sulfate-reducing system that
Species
Start position on genome 682
End posion on genome 609
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCAACTGACTCATAATCAGTGGTCCCAGGTTCAAGT
CCTGGTGGGCCCACaa
Downstream region at tRNA end position 
atcaaaaaaa
Secondary structure (Cloverleaf model)
>WENV180042578	Ile2	CAT
                   n      ACaa atcaaaaaaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T G
                    T     G G T C C     A
      T G A        A      | | | | |     A
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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