The detailed information of tRNA gene sequence


Sequence ID>WENV180042591
Genome IDLQAF01010102
Search identical group
Phylum/Class[LQAF] bioreactor metagenome; bioreactor_2 inoculated with Wadden Sea sediment; 2nd replicate of a sulfate-reducing system that
Species
Start position on genome 314
End posion on genome 389
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
cgacggttac
tRNA gene sequence 
GCCGGTATAGCTCAGTTGGTAGAGCAACTGACTTGTAATCAGTAGGTCCGGGGTTCGACT
CCTCGTGCCGGCACCA
Downstream region at tRNA end position 
gttgagatcg
Secondary structure (Cloverleaf model)
>WENV180042591	Thr	TGT
                   c      ACCA gttgagatcg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     T + G
                     A - T          T C
                    T     G C T C C     A
      T G A        A      | | + | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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