The detailed information of tRNA gene sequence


Sequence ID>WENV180042935
Genome IDLQAH01000009
Search identical group
Phylum/Class[LQAH] bioreactor metagenome; bioreactor_4 inoculated with Wadden Sea sediment; 2nd replicate of a sulfate-reducing system that
Species
Start position on genome 129475
End posion on genome 129390
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
accgactcat
tRNA gene sequence 
GCCGAAGTGGTGGAATTGGTAGACACGTCGGTCTCAAAAACCGATGCCCTCCGGGCGTGC
CGGTTCGATTCCGGCCTTCGGTACCA
Downstream region at tRNA end position 
acaggcatga
Secondary structure (Cloverleaf model)
>WENV180042935	Leu	CAA
                   t      ACCA acaggcatga
                     G + T
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T T
                    T     C G G C C     A
      T A A        G      | | | | |     G
    T       G G T G       G C C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGCCCTCCGGGCGT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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