The detailed information of tRNA gene sequence


Sequence ID>WENV180043181
Genome IDLQAH01007427
Search identical group
Phylum/Class[LQAH] bioreactor metagenome; bioreactor_4 inoculated with Wadden Sea sediment; 2nd replicate of a sulfate-reducing system that
Species
Start position on genome 733
End posion on genome 820
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttttaaatct
tRNA gene sequence 
GGAGGAGTGGCCGAGCGGCTGAAGGCGGCGGTCTTGAAAACCGTTAAGTGTAACAGCTTC
GTGGGTTCGAATCCTACCTCCTCCGCCA
Downstream region at tRNA end position 
tgaaatcagc
Secondary structure (Cloverleaf model)
>WENV180043181	Ser	TGA
                   t      GCCA tgaaatcagc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A T C C     A
      C G A        G      | | + | |     G
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TAAGTGTAACAGCTTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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