The detailed information of tRNA gene sequence


Sequence ID>WENV180043320
Genome IDLQAH01028726
Search identical group
Phylum/Class[LQAH] bioreactor metagenome; bioreactor_4 inoculated with Wadden Sea sediment; 2nd replicate of a sulfate-reducing system that
Species
Start position on genome 454
End posion on genome 378
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccctgttagT
tRNA gene sequence 
GGCCCAGTGGCTCAGTTGGTTAGAGCGCCGGCCTGTCACGCCGGAGGTCGAGGGTTCGAG
TCCCTTCTGGGTCGTCa
Downstream region at tRNA end position 
ttacgtaatt
Secondary structure (Cloverleaf model)
>WENV180043320	Asp	GTC
                   T      GTCa ttacgtaatt
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     T T C C C     A
      T G A        G      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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