The detailed information of tRNA gene sequence


Sequence ID>WENV180043618
Genome IDLQAI01002715
Search identical group
Phylum/Class[LQAI] bioreactor metagenome; bioreactor_5 inoculated with Wadden Sea sediment; 1st replicate of a sulfate-reducing system that
Species
Start position on genome 1697
End posion on genome 1609
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tttaatatcc
tRNA gene sequence 
GGAGAGGTACCGAAGTGGTCATAACGGGGCGGTCTTGAAAACCGTTAGGGTGCAAGCCCA
CGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
aattaacctg
Secondary structure (Cloverleaf model)
>WENV180043618	Ser	TGA
                   c      GCCA aattaacctg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G A G G G     C
  T           | | |                 T T
  C         A C G G
    A T A          G     TAGGGTGCAAGCCCAC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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