The detailed information of tRNA gene sequence


Sequence ID>WENV180044092
Genome IDLQAJ01003066
Search identical group
Phylum/Class[LQAJ] bioreactor metagenome; bioreactor_6 inoculated with Wadden Sea sediment; 2nd replicate of a sulfate-reducing system that
Species
Start position on genome 5
End posion on genome 81
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
nnnnnnttgc
tRNA gene sequence 
AGGTCAGTAGCTCCAATTGGCAGAGCTCCGGACTCCAAATCCGGCTGTTGGGGGTTCGAC
TCCCTCCTGACCTGCCA
Downstream region at tRNA end position 
cttttttggc
Secondary structure (Cloverleaf model)
>WENV180044092	Trp	CCA
                   c      GCCA cttttttggc
                     A - T
                     G - C
                     G - C
                     T - A
                     C - G
                     A - T
                     G - C          T C
                    T     C T C C C     A
      A A C        A      | + | | |     G
    T       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        T     CTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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