The detailed information of tRNA gene sequence


Sequence ID>WENV180044313
Genome IDMAVI01001370
Search identical group
Phylum/Class[MAVI] viral metagenome; RNA from tracheal sample collected at farm Ketul, Bansal
Species
Start position on genome 104
End posion on genome 181
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
ctgacgagcT
tRNA gene sequence 
ACCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTCAAA
TCCTATCCCCGCAACCA
Downstream region at tRNA end position 
agttcggacc
Secondary structure (Cloverleaf model)
>WENV180044313	fMet	CAT
                   T      ACCA agttcggacc
                     A   A
                     C   C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A T C C     A
      C G A        G      | | | | |     A
    C       C G A G       A T A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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