The detailed information of tRNA gene sequence


Sequence ID>WENV180046164
Genome IDMPLT02061971
Search identical group
Phylum/Class[MPLT] marine metagenome; 70 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 686
End posion on genome 778
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agtaatcaac
tRNA gene sequence 
GGAAAGGTGGGTGAGCTGGTTTAAACCAACGGGTTGCTAACTCGTCGTGCGTCGAAAGAT
GTACCGAGGGTTCGAATCCCTCCCTTTCCGCCA
Downstream region at tRNA end position 
ttaatagaga
Secondary structure (Cloverleaf model)
>WENV180046164	Ser	GCT
                   c      GCCA ttaatagaga
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G T G G       G A G G G     C
  G           | | |                 T T
  T         A A C C
    T T A          A     CGTGCGTCGAAAGATGTACC
                    A - T
                    C - G
                    G - C
                    G + T
                    G - C
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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