The detailed information of tRNA gene sequence


Sequence ID>WENV180049055
Genome IDMPLU02030990
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 351
End posion on genome 427
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
cgggctctga
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGCAGCTCGTCGGGCTCATAACCCGAAGGTCGCAGGTTCAAA
TCCTGCCCCCGCTACCA
Downstream region at tRNA end position 
attatttggt
Secondary structure (Cloverleaf model)
>WENV180049055	fMet	CAT
                   a      ACCA attatttggt
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G C A G G     C
    T       | | | |                 T T
    G       G C T C
      G C A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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