The detailed information of tRNA gene sequence


Sequence ID>WENV180049313
Genome IDMPLU02051092
Search identical group
Phylum/Class[MPLU] marine metagenome; 90 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 295
End posion on genome 370
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
ctctataaat
tRNA gene sequence
AGGAGTGTAGCTCAATTGGTAGAGCGCCGGTCTCCAAAACCGGAGGCTGAGGGTTCGAGT
CCCTCCGCTCCTGCCA
Downstream region at tRNA end position
attagagcta
Secondary structure (Cloverleaf model)
>WENV180049313	Trp	CCA
                   t      GCCA attagagcta
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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