The detailed information of tRNA gene sequence


Sequence ID>WENV180056173
Genome IDMPLW02014098
Search identical group
Phylum/Class[MPLW] marine metagenome; 110 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 1497
End posion on genome 1421
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tcacattcat
tRNA gene sequence 
CGCGGGGTGGAGCAGTCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTAGGTTCAAA
TCCTACCCCCGCAACCA
Downstream region at tRNA end position 
aaatagattc
Secondary structure (Cloverleaf model)
>WENV180056173	fMet	CAT
                   t      ACCA aaatagattc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G T A G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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