The detailed information of tRNA gene sequence


Sequence ID>WENV180056433
Genome IDMPLW02031810
Search identical group
Phylum/Class[MPLW] marine metagenome; 110 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 295
End posion on genome 220
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
tttatcgatc
tRNA gene sequence 
AGCGGGGTGGGGAAGCCAGGTCATCCCGGCGGGCTCATAACCCGCAGTTCAGTAGTTCAA
ATCTACTCCCCGCTACtt
Downstream region at tRNA end position 
ttcatataca
Secondary structure (Cloverleaf model)
>WENV180056433	fMet	CAT
                   c      ACtt ttcatataca
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T C A T C     A
    C C G A        G      | | | | |     A
  A         A G G G       A G T A G     C
  G         | | | |                 T T
  G         T C C C
    T C A          G     AGTTC
                    G - C
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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