The detailed information of tRNA gene sequence


Sequence ID>WENV180058154
Genome IDMPLX02038915
Search identical group
Phylum/Class[MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 5808
End posion on genome 5717
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaacatctct
tRNA gene sequence 
GGAGGTGTGGCAGAGTCTGGTTGAATGCACCGGTCTTGAAAACCGGCGTCCGCCTTACGG
CGGGCCAGAGGTTCGAATCCTCTCGCCTCCGCaa
Downstream region at tRNA end position 
attccctgaa
Secondary structure (Cloverleaf model)
>WENV180058154	Ser	TGA
                   t      GCaa attccctgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     T C T C C     A
    C T G A        G      | | | | |     G
  T         G A C G       A G A G G     C
  G           | | |                 T T
  G         A T G C
    T T G A        A     CGTCCGCCTTACGGCGGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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