The detailed information of tRNA gene sequence


Sequence ID>WENV180059282
Genome IDMPLX02103478
Search identical group
Phylum/Class[MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 290
End posion on genome 385
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
taaattattt
tRNA gene sequence 
GGGAATGATTGCGAGGCTGGTGCCCGCTACGGTCTTCAAAACCGTTGTCCCGATTTTTAA
TCGGGAGCTGGGTTCGATTCCCAGGCGTTCCCGCCA
Downstream region at tRNA end position 
tttaaaagcc
Secondary structure (Cloverleaf model)
>WENV180059282	SeC	TCA
                   t      GCCA tttaaaagcc
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T + G
                     G - C
                     A   G          T T
                    T     G A C C C     A
      C G G        T      | | | | |     G
    T       A G C G       C T G G G     C
    G         | | |                 T T
    G       C C G C
      T G C        T     TGTCCCGATTTTTAATCGGGAG
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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