The detailed information of tRNA gene sequence


Sequence ID>WENV180059426
Genome IDMPLX02112039
Search identical group
Phylum/Class[MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 696
End posion on genome 782
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gtctaattat
tRNA gene sequence 
GCGGGGGTCGCCTAGCCTGGTAGGGCGTAGGATTGCTAATCCTATGTTCGCAAGAACTCG
TGGGTTCAAATCCCTCTCCCCGCGCCA
Downstream region at tRNA end position 
ttaaaactta
Secondary structure (Cloverleaf model)
>WENV180059426	Ser	GCT
                   t      GCCA ttaaaactta
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T C C C     A
      C G A        C      |   | | |     A
    C       T C C G       G T G G G     C
    T       + | | |                 T T
    G       G G G C
      G T A        G     TGTTCGCAAGAACTC
                    T - A
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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