The detailed information of tRNA gene sequence


Sequence ID>WENV180060233
Genome IDMPLX02158115
Search identical group
Phylum/Class[MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 4174
End posion on genome 4100
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
atcacataaa
tRNA gene sequence 
GGCGGTGTAGCTCAGATGGTTAGAGCATACGGCTCATATCCGTAGTGTCCGGGGTTCAAT
TCCCTGCACCGCCACta
Downstream region at tRNA end position 
atttttttac
Secondary structure (Cloverleaf model)
>WENV180060233	Met	CAT
                   a      ACta atttttttac
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     G T C C C     A
      A G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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