The detailed information of tRNA gene sequence


Sequence ID>WENV180060292
Genome IDMPLX02161407
Search identical group
Phylum/Class[MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 688
End posion on genome 612
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
nnnnnnttat
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTAGGTTCAAA
TCCTACCCCCGCAACCA
Downstream region at tRNA end position 
aatgaataaa
Secondary structure (Cloverleaf model)
>WENV180060292	fMet	CAT
                   t      ACCA aatgaataaa
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A T C C     A
      T G A        G      | | | | |     A
    C       C G A G       G T A G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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