The detailed information of tRNA gene sequence


Sequence ID>W141004309
Genome IDAFXD01000055
Search identical group
Phylum/ClassCyanobacteriota
SpeciesArthrospira platensis C1 [AFXD]
Start position on genome 24999
End posion on genome 24910
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ggaaatgccT
tRNA gene sequence 
GGAGAGGTGGCAGAGATGGTCGATTGCGACGGACTCGAAATTCGTTAGGGGTGCAAGCTC
CTCGTGGGTTCGAATCCCACCCTCTCCGGtt
Downstream region at tRNA end position 
ttgctcaggc
Secondary structure (Cloverleaf model)
>W141004309	Ser	CGA
                   T      GGtt ttgctcaggc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    T A G A        G      | | | | |     G
  G         G A C G       G T G G G     C
  G         + | | |                 T T
  T         T T G C
    C G A          G     TAGGGGTGCAAGCTCCTC
                    A - T
                    C - G
                    G - C
                    G + T
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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