The detailed information of tRNA gene sequence


Sequence ID>WENV180061875
Genome IDMPLX02250381
Search identical group
Phylum/Class[MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 2345
End posion on genome 2270
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
actgaaaaat
tRNA gene sequence 
AGGCCAGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGATT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
ggacaaacgt
Secondary structure (Cloverleaf model)
>WENV180061875	Trp	CCA
                   t      GCCA ggacaaacgt
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T T
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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