The detailed information of tRNA gene sequence


Sequence ID>WENV180062125
Genome IDMPLX02266821
Search identical group
Phylum/Class[MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 617
End posion on genome 541
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
attctcagcg
tRNA gene sequence 
CGCGGGATGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTTGGTTCAAA
TCCAGCTCCCGCAACCA
Downstream region at tRNA end position 
acttttagcc
Secondary structure (Cloverleaf model)
>WENV180062125	fMet	CAT
                   g      ACCA acttttagcc
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G A C C     A
      C G A        G      | + | | |     A
    C       C G A G       G T T G G     C
    C       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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