The detailed information of tRNA gene sequence


Sequence ID>WENV180063107
Genome IDMPLX02331239
Search identical group
Phylum/Class[MPLX] marine metagenome; 120 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 11571
End posion on genome 11496
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aaaacaatct
tRNA gene sequence 
GGATCCGTCGTCTAGCCTGGTTTGGATGCTGCACTCACACTGCAGAGGTCGCGAGTTCAA
GTCTCGCCGGATCCACtt
Downstream region at tRNA end position 
acattatatt
Secondary structure (Cloverleaf model)
>WENV180063107	Val	CAC
                   t      ACtt acattatatt
                     G - C
                     G - C
                     A - T
                     T - A
                     C - G
                     C - G
                     G - C          T G
                    T     C G C T C     A
    C C G A        C      | | | | |     A
  T         T C T G       G C G A G     C
  G         + | | +                 T T
  G         G G A T
    T T T          G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    A - T
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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