The detailed information of tRNA gene sequence


Sequence ID>W141004566
Genome IDAFYN01000025
Search identical group
Phylum/ClassBacillota
SpeciesLacticaseibacillus paracasei CRF28 [AFYN]
Start position on genome 1520
End posion on genome 1433
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cttgtgtttt
tRNA gene sequence 
GGAGAGTTGGCAGAGTGGTAATGCAACGGACTCGAAATCCGTCGAACCGGCTAATACCGG
CGCGCAGGTTCAAATCCTGTACTCTCCTtct
Downstream region at tRNA end position 
ttaattgcaa
Secondary structure (Cloverleaf model)
>W141004566	Ser	CGA
                   t      Ttct ttaattgcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     T G T C C     A
        G A        G      + | | | |     A
      T     G A C G       G C A G G     C
      G       | | |                 T T
      G     A T G C
        T A        A     CGAACCGGCTAATACCGGCGC
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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