The detailed information of tRNA gene sequence


Sequence ID>WENV180069486
Genome IDMPLZ02110911
Search identical group
Phylum/Class[MPLZ] marine metagenome; 160 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 173
End posion on genome 80
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgacccacac
tRNA gene sequence 
GGTGAGGTGGCCGAGAGGCTGAAGGCGGCGGTTTGCTAAACCGTTGTAGGGGCTTAAACC
TCTACCCAGGGTTCGAATCCCTGCCTCACCGCCA
Downstream region at tRNA end position 
atttcttatt
Secondary structure (Cloverleaf model)
>WENV180069486	Ser	GCT
                   c      GCCA atttcttatt
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TGTAGGGGCTTAAACCTCTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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