The detailed information of tRNA gene sequence


Sequence ID>W141005399
Genome IDAGDS01000006
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema denticola ATCC 33520 [AGDS]
Start position on genome 93508
End posion on genome 93594
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cctacatttT
tRNA gene sequence 
GGAGCGATGGCCGAGCGGTTGAAGGCGGCGGTCTTGAAAACCGTTGTGCTGAGAGGTACC
GGGGGTTCGAATCCCTCTCGCTCCGTta
Downstream region at tRNA end position 
atgtttgtaa
Secondary structure (Cloverleaf model)
>W141005399	Ser	TGA
                   T      GTta atgtttgtaa
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T G A        G     TGTGCTGAGAGGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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