The detailed information of tRNA gene sequence


Sequence ID>W141005406
Genome IDAGDS01000006
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema denticola ATCC 33520 [AGDS]
Start position on genome 357181
End posion on genome 357108
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tatcatcttT
tRNA gene sequence 
GGTCCCTTCGTCTATCGGTTAGGACATGAGATTCTCAATCTTAAAAGACGGGTTCGATTC
CCGTAGGGACCGGtt
Downstream region at tRNA end position 
ttcccgtctg
Secondary structure (Cloverleaf model)
>W141005406	Glu	CTC
                   T      GGtt ttcccgtctg
                     G - C
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T G C C C     A
      C T A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     AAAG
                    T - A
                    G + T
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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