The detailed information of tRNA gene sequence


Sequence ID>W141005424
Genome IDAGDS01000012
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema denticola ATCC 33520 [AGDS]
Start position on genome 59522
End posion on genome 59596
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
gctgtcgtta
tRNA gene sequence 
CGGGCAATAGCGCAGTTGGTTAGCGTACAAGTCTGGGGGACTTGGGGTCGGCGGTTCAAA
TCCGCCTTGCCCGACtt
Downstream region at tRNA end position 
ttataactct
Secondary structure (Cloverleaf model)
>W141005424	Pro	GGG
                   a      ACtt ttataactct
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T          T A
                    T     C C G C C     A
      T G A        A      | | | | |     A
    T       C G C G       G G C G G     C
    G       | | | +                 T T
    G       G C G T
      T T A        A     GGGTC
                    C - G
                    A - T
                    A - T
                    G - C
                    T - A
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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