The detailed information of tRNA gene sequence


Sequence ID>W141005427
Genome IDAGDS01000012
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema denticola ATCC 33520 [AGDS]
Start position on genome 51532
End posion on genome 51459
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
aagaaattaa
tRNA gene sequence 
GGGCAATTAGCTCAGTTGGTTAGAGTACAAGCATGACACGCTTGGGGTCACTGGTTCGAT
TCCAGTATTGCCCAttt
Downstream region at tRNA end position 
ttgtaagtct
Secondary structure (Cloverleaf model)
>W141005427	Val	GAC
                   a      Attt ttgtaagtct
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T
                     T - A          T T
                    T     T G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     GGGTC
                    C - G
                    A - T
                    A - T
                    G - C
                    C - G
                  A       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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