The detailed information of tRNA gene sequence


Sequence ID>W141005440
Genome IDAGDS01000023
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema denticola ATCC 33520 [AGDS]
Start position on genome 122543
End posion on genome 122469
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ttacagcttT
tRNA gene sequence 
GGGGAATTAGCTCAGTTGGTAGAGCGATTGGTTCGCAATCAATAGGTCGTGGGTTCGATT
CCCATATTCTCCATta
Downstream region at tRNA end position 
tttttttccg
Secondary structure (Cloverleaf model)
>W141005440	Ala	CGC
                   T      ATta tttttttccg
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     A - T
                     T - A          T T
                    T     T A C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    A - T
                    T - A
                    T - A
                    G - C
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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