The detailed information of tRNA gene sequence


Sequence ID>W141005519
Genome IDAGDU01000020
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema denticola ATCC 35404 [AGDU]
Start position on genome 88141
End posion on genome 88055
Amino Acid Pseudo
Anticodon CGA
Upstream region at tRNA start position 
ttttattttT
tRNA gene sequence 
GGAGAGATGCGAGAGCGGTCGAATCGGGCGGTCTCGAAAACCGTTGTACCGCAAGGTACC
GGGGGTTCGAATCCCCCTCTCTCCGTtt
Downstream region at tRNA end position 
tatgacggag
Secondary structure (Cloverleaf model)
>W141005519	Pseudo	CGA
                   T      GTtt tatgacggag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G A G C       G G G G G     C
    G         | | |                 T T
    T       A T C G
      C G A        G     TGTACCGCAAGGTACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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