The detailed information of tRNA gene sequence


Sequence ID>WENV180074787
Genome IDMPMA02166968
Search identical group
Phylum/Class[MPMA] marine metagenome; 180 m water sample filtered on 0.2 um supor filter
Species
Start position on genome 20308
End posion on genome 20219
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnnnnnnaac
tRNA gene sequence 
GGAGAGATGGCTGAGCGGTTGAAAGCACCGGTCTTGAAAACCGGCAAAGGGGCAACTCTT
TCCTGGGTTCGAATCCCAGTCTCTCCGCCA
Downstream region at tRNA end position 
ttaaaattaa
Secondary structure (Cloverleaf model)
>WENV180074787	Ser	TGA
                   c      GCCA ttaaaattaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G A C C C     A
      C G A        G      | | | | |     G
    G       G T C G       C T G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        A     CAAAGGGGCAACTCTTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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