The detailed information of tRNA gene sequence


Sequence ID>W141005790
Genome IDAGIV01000001
Search identical group
Phylum/ClassRhodothermota
SpeciesRhodothermus marinus SG0.5JP17-171 [AGIV]
Start position on genome 1170607
End posion on genome 1170683
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaggcgtct
tRNA gene sequence 
GGCGCGGTAGCTCAGTCGGTTAGAGCGTCGGATTCATAACCCGGAGGTCGAGGGTTCGAA
TCCCTCCCGCGCCACCA
Downstream region at tRNA end position 
cgaaagaagc
Secondary structure (Cloverleaf model)
>W141005790	Met	CAT
                   t      ACCA cgaaagaagc
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     G
    C       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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